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Rebuild Comet and MaRaCluster with zlib 1.3.2 and expat 2.8.5; remove X!Tandem - #115

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timosachsenberg wants to merge 11 commits into

claude/vulnerable-bundled-libraries-oqtouy

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Rebuild Comet and MaRaCluster with zlib 1.3.2 and expat 2.8.5; remove X!Tandem#115
timosachsenberg wants to merge 11 commits into
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claude/vulnerable-bundled-libraries-oqtouy

Commits on Sep 29, 2026
- Add build recipes for Comet and MaRaCluster with current zlib and expat
  claude
  committed
  997fe9b
- rebuild-engines: MSFileReader's runtime on Windows, git in the containers
  claude
  committed
  eaa67a0
- Check out ProteoWizard as its source tarballs have it
  claude
  committed
  470bf36
- Remove X!Tandem
  claude
  committed
  1eadf02
- rebuild-engines: run MSBuild from cmd
  claude
  committed
  fdf2b06
- recipes: count only full versions; retry downloads longer
  claude
  committed
  a630e34
- maracluster: configure zlib; repeat the batch runs to catch crashes
  claude
  committed
  7e5d20b
- Compare MaRaCluster as MaRaClusterAdapter runs it; build in pull requests
  claude
  committed
  75b970e
- recipes: a comment above every function
  claude
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  79ef80c
- compare/comet.sh: require the same output files from both binaries
  claude
  committed
  8634ce4
- Replace Comet and MaRaCluster with builds against zlib 1.3.2 and expat 2.8.5
  claude
  committed
  c5c2923